2 State Kinetic Data Formulas
From Foldeomics Wiki
PFD uses formulas for calculating some of the data entered.
Below is a list of formulas used for 2 State Kinetic Data.
Note: In mutant template examples the symbols '$' & '#' refer to wildtype & mutant respectively.
Contents |
kD-N
Kilocalories
KD-N = kuH2O / kfH2O
KD-N error = (kuH2O * kfH2O) * ((kfH2O error / kuH2O)2 + (kuH2O error / kfH2O)2)/2
Mutant Template
BH = AG/AT
BI = (AG*AT)*((AU/AG)2+(AH/AT)2)/2
mD-N
Kilocalories
mD-N kinetic = m‡-N + m‡-D
mD-N kinetic error = (m‡-N error2 + m‡-D error2)/2
Mutant Template
BL = AM+AZ
BM = (AN2+BA2)/2
∆GD-NH2O kinetic
Kilocalories
∆GD-NH2O kinetic = mD-N kinetic * [denat] 50% kinetic
∆GD-NH2O kinetic error = (mD-N kinetic * [denat] 50% kinetic) * (([denat] 50% kinetic error / mD-N kinetic)2 + (mD-N kinetic error / [denat] 50% kinetic)2)/2
Mutant Template
BN = BL*BJ
BO = (BL*BJ)*((BK/BL)2+(BM/BJ)2)/2
BT kinetic uf
Kilocalories
BT kinetic uf = 1-(m‡-N / mD-N kinetic error)
BT kinetic uf error = (m‡-N * mD-N kinetic) * ((mD-N kinetic error / m‡-N)2 + (m‡-N error / mD-N kinetic)2)/2
Mutant Template
BP = 1-(AM/BL)
BQ = (AM*BL)*((BM/AM)2+(AN/BL)2)/2
BT kinetic f
Kilocalories
BT kinetic f = m‡-D / mD-N kinetic
BT kinetic f error = (m‡-D * mD-N kinetic) * ((mD-N kinetic error / m‡-D)2 + (m‡-D error / mD-N kinetic)2)/2
Mutant Template
BR = AZ/BL
BS = (AZ*BL)*((BM/AZ)2+(BA/BL)2)/2
BT equil uf
Kilocalories
BT equil uf = 1-(m‡-N / mD-N)
BT equil uf error = (m‡-N * mD-N) * ((mD-N error / m‡-N)2 + (m‡-N error / mD-N)2)/2
Mutant Template
BT = 1-(AM/P)
BU = (AM*P)*((Q/AM)2+(AN/P)2)/2
BT equil f
Kilocalories
BT equil f = m‡-D / mD-N
BT equil f error = (m‡-D * mD-N) * ((mD-N error / m‡-D)2 + (m‡-D error / mD-N)2)/2
Mutant Template
BV = AZ/P
BW = (AZ*P)*((Q/AZ)2 + (BA8/P8)2)/2
Mark Bate 12:14, 5 September 2006 (EST)
